Pseudo-terminal will not be allocated because stdin is not a terminal. mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5’ mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/11366’ info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 info: random number seed not defined, using genr8 default (different seed each run) NEVENTS = 50000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/hd_utilities/b1pi_test RUN = 11366 SEED = Copying script files and macros ... ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh’ -> ‘./b1pi_cron_one.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron.sh’ -> ‘./b1pi_cron.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1_pi.input’ -> ‘./b1_pi.input’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_message.sh’ -> ‘./b1pi_message.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh’ -> ‘./b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test_valgrind.sh’ -> ‘./b1pi_test_valgrind.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/hddm_counter.pl’ -> ‘./hddm_counter.pl’ ‘/group/halld/Software/hd_utilities/b1pi_test/index.html’ -> ‘./index.html’ cp: omitting directory ‘/group/halld/Software/hd_utilities/b1pi_test/macros’ ‘/group/halld/Software/hd_utilities/b1pi_test/my_b1pi_test.sh’ -> ‘./my_b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/README’ -> ‘./README’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/anal1.C’ -> ‘./anal1.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.C’ -> ‘./b1_pi.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.C’ -> ‘./b1pi_gen.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.h’ -> ‘./b1pi_gen.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.h’ -> ‘./b1_pi.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.C’ -> ‘./b1pi_rec.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.h’ -> ‘./b1pi_rec.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/fit_voigt.C’ -> ‘./fit_voigt.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/makeallplots.C’ -> ‘./makeallplots.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mass_X.C’ -> ‘./mass_X.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mk_pics.C’ -> ‘./mk_pics.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/momentum.C’ -> ‘./momentum.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/StandardLabels.C’ -> ‘./StandardLabels.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/theta.C’ -> ‘./theta.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/update_db.py’ -> ‘./update_db.py’ Running genr8 ... Using runNo: 11366 Maximum number of events: 50000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 49 Events generated: 200 Events accepted: 97 Events generated: 300 Events accepted: 140 Events generated: 400 Events accepted: 188 Events generated: 500 Events accepted: 244 Events generated: 600 Events accepted: 293 Events generated: 700 Events accepted: 345 Events generated: 800 Events accepted: 392 Events generated: 900 Events accepted: 445 Events generated: 1000 Events accepted: 490 Events generated: 10000 Events accepted: 4664 Events generated: 20000 Events accepted: 9246 Events generated: 30000 Events accepted: 13926 Events generated: 40000 Events accepted: 18637 Events generated: 50000 Events accepted: 23269 Events generated: 60000 Events accepted: 27970 Events generated: 70000 Events accepted: 32598 Events generated: 80000 Events accepted: 37316 Events generated: 90000 Events accepted: 41915 Events generated: 100000 Events accepted: 46506 Max Lorentz Factor:0.001284 Events generated:107543 Events accepted:50000 Setting random number seed to: 1597095010 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote event 21000 Wrote event 22000 Wrote event 23000 Wrote event 24000 Wrote event 25000 Wrote event 26000 Wrote event 27000 Wrote event 28000 Wrote event 29000 Wrote event 30000 Wrote event 31000 Wrote event 32000 Wrote event 33000 Wrote event 34000 Wrote event 35000 Wrote event 36000 Wrote event 37000 Wrote event 38000 Wrote event 39000 Wrote event 40000 Wrote event 41000 Wrote event 42000 Wrote event 43000 Wrote event 44000 Wrote event 45000 Wrote event 46000 Wrote event 47000 Wrote event 48000 Wrote event 49000 Wrote event 50000 Wrote 50000 events to b1_pi.hddm Creating control.in file ... Running hdgeant4 ... hdgeant4 run.mac ************************************************************* Geant4 version Name: geant4-10-02-patch-02 [MT] (17-June-2016) << in Multi-threaded mode >> Copyright : Geant4 Collaboration Reference : NIM A 506 (2003), 250-303 WWW : http://cern.ch/geant4 ************************************************************* JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:11366 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>comment: Variation for simulations with data conditions JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20160222 ... Nx=221 Ny=1 Nz=701 ) at 0x45b8ca0 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20160222 rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 JANA >>154921 entries found (Creating DGeometry: JANA >> Run requested:11366 found:11366 JANA >> Run validity range: 11366-11366 JANA >> URL="ccdb:///GEOMETRY/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 25 material maps in calib. DB JANA >>Read in 25 material maps for run 11366 containing 76153 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0x4beb010 Initializing the Geant4 kernel... Root geometry volume SITE::1 configured as World In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 STC: ALL parameters loaded from ccdb CDC: ALL parameters loaded from ccdb FDC: ALL parameters loaded from ccdb BCAL: ALL parameters loaded from ccdb FTOF: ALL parameters loaded from ccdb FCAL: ALL parameters loaded from ccdb Additional geometry layer configured as ParallelWorld1 Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definition. G4PhysicsListHelper::AddTransportation()--- G4CoupledTransportation is used New QGSP_FTFP_BERT physics list, replaces LEP with FTF/P for p/n/pi (/K?) Thresholds: 1) between BERT and FTF/P over the interval 6 to 8 GeV. 2) between FTF/P and QGS/P over the interval 12 to 25 GeV. -- quasiElastic was asked to be 1 Changed to 1 for QGS and to 0 (must be false) for FTF G4WT0 > G4WT0 > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ G4WT0 > Local thread RunManagerKernel version Name: geant4-10-02-patch-02 [MT] G4WT0 > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ G4WT0 > G4WT0 > Opened input file: b1_pi.hddm G4WT0 > In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 G4WT0 > Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definition. G4WT0 > G4PhysicsListHelper::AddTransportation()--- G4CoupledTransportation is used G4WT0 > New QGSP_FTFP_BERT physics list, replaces LEP with FTF/P for p/n/pi (/K?) Thresholds: G4WT0 > 1) between BERT and FTF/P over the interval 6 to 8 GeV. G4WT0 > 2) between FTF/P and QGS/P over the interval 12 to 25 GeV. G4WT0 > -- quasiElastic was asked to be 1 G4WT0 > Changed to 1 for QGS and to 0 (must be false) for FTF G4WT0 > JCalibration context: variation=mc G4WT0 > JCalibration context: variation=mc G4WT0 > Info: RF reference plane set to 65 cm. G4WT0 > New event 0 with starting seeds 960416608, 2004255418 G4WT0 > === WARNING in GlueXPrimaryGenerator::GeneratePrimaryVertex === G4WT0 > pi- found in input MC record, geant3 type 9, PDG type -211 has unphysical mass: G4WT0 > expected 139.57 MeV, found 140 MeV, difference -429.592 keV =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== Thread 2 (Thread 0x7fdcf4dcd700 (LWP 36094)): #0 0x00007fdcff988469 in waitpid () at /lib64/libc.so.6 #1 0x00007fdcff905f12 in do_system () at /lib64/libc.so.6 #2 0x00007fdcff9062c1 in system () at /lib64/libc.so.6 #3 0x00007fdd08a69ae9 in TUnixSystem::StackTrace() (this=0x3172100) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #4 0x00007fdd08a6c3bc in TUnixSystem::DispatchSignals(ESignals) (this=0x3172100, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:3625 #5 0x00007fdd0495b5f0 in () at /lib64/libpthread.so.0 #6 0x00007fdd125624c5 in GlueXPhotonBeamGenerator::GenerateTaggerHit(G4Event const*, double, double, int) (this=0x0, event=event entry=0x7fdce11e16b0, energy=0, time=9.532824124368238e-130, time entry=-8.0160320639999973, bg=bg entry=0) at src/GlueXPhotonBeamGenerator.cc:618 #7 0x00007fdd1257c6f6 in GlueXPrimaryGeneratorAction::GeneratePrimariesHDDM(G4Event*) (this=0x7fdcec1069b0, anEvent=0x7fdce11e16b0) at src/GlueXPrimaryGeneratorAction.cc:900 #8 0x00007fdd0e62322d in G4WorkerRunManager::GenerateEvent(int) (this=0x7fdcec072970, i_event=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:376 #9 0x00007fdd0e62125d in G4WorkerRunManager::ProcessOneEvent(int) (this=0x7fdcec072970, i_event=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:250 #10 0x00007fdd0e6213f9 in G4WorkerRunManager::DoEventLoop(int, char const*, int) (this=0x7fdcec072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:231 #11 0x00007fdd0e6159ee in G4RunManager::BeamOn(int, char const*, int) (this=0x7fdcec072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:273 #12 0x00007fdd0e622181 in G4WorkerRunManager::DoWork() (this=0x7fdcec072970) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:619 #13 0x00007fdd0e62be54 in G4MTRunManagerKernel::StartThread(void*) (context=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManagerKernel.cc:191 #14 0x00007fdd04953e65 in start_thread () at /lib64/libpthread.so.0 #15 0x00007fdcff9c188d in clone () at /lib64/libc.so.6 Thread 1 (Thread 0x7fdd12f4b9c0 (LWP 34661)): #0 0x00007fdd049579f5 in pthread_cond_wait GLIBC_2.3.2 () at /lib64/libpthread.so.0 #1 0x00007fdd0e61d387 in G4MTRunManager::WaitForEndEventLoopWorkers() (this=0x7fff0c8a9c70) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManager.cc:797 #2 0x00007fdd0e62057d in G4MTRunManager::RunTermination() (this=0x7fff0c8a9c70) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManager.cc:393 #3 0x00007fdd0e6159f7 in G4RunManager::BeamOn(int, char const*, int) (this=0x7fff0c8a9c70, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:274 #4 0x00007fdd0e62d69c in G4RunMessenger::SetNewValue(G4UIcommand*, G4String) (this=0x34a8c90, command=command entry=0x34a9100, newValue=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunMessenger.cc:376 #5 0x00007fdd0addcd15 in G4UIcommand::DoIt(G4String) (this=this entry=0x34a9100, parameterList=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcommand.cc:230 #6 0x00007fdd0adf4df8 in G4UImanager::ApplyCommand(char const*) (this=0x3239320, aCmd=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:523 #7 0x00007fdd0adf58a8 in G4UImanager::ApplyCommand(G4String const&) (this=, aCmd=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:441 #8 0x00007fdd0adcd30d in G4UIbatch::ExecCommand(G4String const&) (this=this entry=0x6623690, command=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIbatch.cc:170 #9 0x00007fdd0adce9ab in G4UIbatch::SessionStart() (this=0x6623690) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIbatch.cc:215 #10 0x00007fdd0adf00a3 in G4UImanager::ExecuteMacroFile(char const*) (this=this entry=0x3239320, fileName=0x6623678 "run.mac") at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:296 #11 0x00007fdd0ade64f9 in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String) (this=0x3239730, command=command entry=0x3239e30, newValue=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcontrolMessenger.cc:313 #12 0x00007fdd0addcd15 in G4UIcommand::DoIt(G4String) (this=this entry=0x3239e30, parameterList=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcommand.cc:230 #13 0x00007fdd0adf4df8 in G4UImanager::ApplyCommand(char const*) (this=this entry=0x3239320, aCmd=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:523 #14 0x00007fdd0adf58a8 in G4UImanager::ApplyCommand(G4String const&) (this=this entry=0x3239320, aCmd=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:441 #15 0x00007fdd119b1c2e in main(int, char**) (argc=2, argv=0x7fff0c8abe98) at src/hdgeant4.cc:230 #16 0x00007fdcff8e5505 in __libc_start_main () at /lib64/libc.so.6 #17 0x0000000000684977 in _start () =========================================================== The lines below might hint at the cause of the crash. You may get help by asking at the ROOT forum http://root.cern.ch/forum. Only if you are really convinced it is a bug in ROOT then please submit a report at http://root.cern.ch/bugs. Please post the ENTIRE stack trace from above as an attachment in addition to anything else that might help us fixing this issue. =========================================================== #6 0x00007fdd125624c5 in GlueXPhotonBeamGenerator::GenerateTaggerHit(G4Event const*, double, double, int) (this=0x0, event=event entry=0x7fdce11e16b0, energy=0, time=9.532824124368238e-130, time entry=-8.0160320639999973, bg=bg entry=0) at src/GlueXPhotonBeamGenerator.cc:618 #7 0x00007fdd1257c6f6 in GlueXPrimaryGeneratorAction::GeneratePrimariesHDDM(G4Event*) (this=0x7fdcec1069b0, anEvent=0x7fdce11e16b0) at src/GlueXPrimaryGeneratorAction.cc:900 #8 0x00007fdd0e62322d in G4WorkerRunManager::GenerateEvent(int) (this=0x7fdcec072970, i_event=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:376 #9 0x00007fdd0e62125d in G4WorkerRunManager::ProcessOneEvent(int) (this=0x7fdcec072970, i_event=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:250 #10 0x00007fdd0e6213f9 in G4WorkerRunManager::DoEventLoop(int, char const*, int) (this=0x7fdcec072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:231 #11 0x00007fdd0e6159ee in G4RunManager::BeamOn(int, char const*, int) (this=0x7fdcec072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:273 #12 0x00007fdd0e622181 in G4WorkerRunManager::DoWork() (this=0x7fdcec072970) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:619 #13 0x00007fdd0e62be54 in G4MTRunManagerKernel::StartThread(void*) (context=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManagerKernel.cc:191 #14 0x00007fdd04953e65 in start_thread () at /lib64/libpthread.so.0 #15 0x00007fdcff9c188d in clone () at /lib64/libc.so.6 =========================================================== Running mcsmear ... mcsmear -PJANA:BATCH_MODE=1 -PTHREAD_TIMEOUT=500 hdgeant.hddm JANA >> Enabling z compression of output HDDM file stream (default) JANA >> Enabling CRC data integrity check in output HDDM file stream JANA >>Opening source "hdgeant.hddm" of type: HDDM JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >>Installing special signal handler for mcsmear... JANA >> JANA >>No more event sources JANA >>Thread 0x7f5079eb7700 completed gracefully: Mon Aug 10 08:01:54 2020 JANA >>Merging thread 0 (0x7f5079eb7700) ... Closed HDDM file 0 event written to hdgeant_smeared.hddm JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Running hd_root with danarest ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=danarest hdgeant_smeared.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/halld_recon/Linux_CentOS7.7-x86_64-gcc4.8.5/plugins/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >>Opening source "hdgeant_smeared.hddm" of type: HDDM JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>No more event sources JANA >>Thread 0x7f2b26461700 completed gracefully: Mon Aug 10 08:01:56 2020 JANA >>Merging thread 0 (0x7f2b26461700) ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Running hd_root with b1pi_hists & monitoring_hists ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/halld_recon/Linux_CentOS7.7-x86_64-gcc4.8.5/plugins/b1pi_hists.so" ... JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/halld_recon/Linux_CentOS7.7-x86_64-gcc4.8.5/plugins/monitoring_hists.so" ... Opened ROOT file "hd_root.root" ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "dana_rest.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx JANA >> JANA >>Telling all threads to quit ... NO VALID EVENT SOURCES GIVEN !!! xxxxxxxxxxxx JANA ERROR>> JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... JANA >>Closing shared object handle 1 ... Exit code: 66 Create plots root -b -q mk_pics.C ------------------------------------------------------------ | Welcome to ROOT 6.08/06 http://root.cern.ch | | (c) 1995-2016, The ROOT Team | | Built for linuxx8664gcc | | From tag v6-08-06, 2 March 2017 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... #0 0x00007fe6788d441c in waitpid () from /lib64/libc.so.6 #1 0x00007fe678851f12 in do_system () from /lib64/libc.so.6 #2 0x00007fe6798d7ae9 in TUnixSystem::StackTrace (this=0x9698e0) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #3 0x00007fe6751edac5 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #4 0x00007fe6751ed438 in cling_runtime_internal_throwIfInvalidPointer () from /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #5 0x00007fe67a0114ae in ?? () #6 0x00007ffd761e5dd0 in ?? () #7 0x00000000016227b0 in ?? () #8 0x0000000000000000 in ?? () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments Save test data python update_db.py Traceback (most recent call last): File "update_db.py", line 28, in with open("data.txt") as f: IOError: [Errno 2] No such file or directory: 'data.txt' #count events /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 28: hddm_counter.pl: command not found #count b1_pi.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 29: hddm_counter.pl: command not found #count hdgeant.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 30: hddm_counter.pl: command not found #count hdgeant_smeared.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 31: hddm_counter.pl: command not found #count dana_rest.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 32: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5’ mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/Run11366’ cp: cannot stat ‘*.pdf’: No such file or directory cp: cannot stat ‘*.gif’: No such file or directory ‘index.html’ -> ‘/group/halld/www/halldweb/html/b1pi/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/Run11366/index.html’ mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/30480’ info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 info: random number seed not defined, using genr8 default (different seed each run) NEVENTS = 50000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/hd_utilities/b1pi_test RUN = 30480 SEED = Copying script files and macros ... ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh’ -> ‘./b1pi_cron_one.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron.sh’ -> ‘./b1pi_cron.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1_pi.input’ -> ‘./b1_pi.input’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_message.sh’ -> ‘./b1pi_message.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh’ -> ‘./b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test_valgrind.sh’ -> ‘./b1pi_test_valgrind.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/hddm_counter.pl’ -> ‘./hddm_counter.pl’ ‘/group/halld/Software/hd_utilities/b1pi_test/index.html’ -> ‘./index.html’ cp: omitting directory ‘/group/halld/Software/hd_utilities/b1pi_test/macros’ ‘/group/halld/Software/hd_utilities/b1pi_test/my_b1pi_test.sh’ -> ‘./my_b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/README’ -> ‘./README’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/anal1.C’ -> ‘./anal1.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.C’ -> ‘./b1_pi.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.C’ -> ‘./b1pi_gen.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.h’ -> ‘./b1pi_gen.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.h’ -> ‘./b1_pi.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.C’ -> ‘./b1pi_rec.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.h’ -> ‘./b1pi_rec.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/fit_voigt.C’ -> ‘./fit_voigt.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/makeallplots.C’ -> ‘./makeallplots.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mass_X.C’ -> ‘./mass_X.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mk_pics.C’ -> ‘./mk_pics.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/momentum.C’ -> ‘./momentum.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/StandardLabels.C’ -> ‘./StandardLabels.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/theta.C’ -> ‘./theta.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/update_db.py’ -> ‘./update_db.py’ Running genr8 ... Using runNo: 30480 Maximum number of events: 50000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 46 Events generated: 200 Events accepted: 100 Events generated: 300 Events accepted: 144 Events generated: 400 Events accepted: 188 Events generated: 500 Events accepted: 229 Events generated: 600 Events accepted: 280 Events generated: 700 Events accepted: 328 Events generated: 800 Events accepted: 380 Events generated: 900 Events accepted: 426 Events generated: 1000 Events accepted: 475 Events generated: 10000 Events accepted: 4818 Events generated: 20000 Events accepted: 9596 Events generated: 30000 Events accepted: 14412 Events generated: 40000 Events accepted: 19146 Events generated: 50000 Events accepted: 23922 Events generated: 60000 Events accepted: 28712 Events generated: 70000 Events accepted: 33489 Events generated: 80000 Events accepted: 38308 Events generated: 90000 Events accepted: 42996 Events generated: 100000 Events accepted: 47712 Max Lorentz Factor:0.001260 Events generated:104933 Events accepted:50000 Setting random number seed to: 1597099796 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote event 21000 Wrote event 22000 Wrote event 23000 Wrote event 24000 Wrote event 25000 Wrote event 26000 Wrote event 27000 Wrote event 28000 Wrote event 29000 Wrote event 30000 Wrote event 31000 Wrote event 32000 Wrote event 33000 Wrote event 34000 Wrote event 35000 Wrote event 36000 Wrote event 37000 Wrote event 38000 Wrote event 39000 Wrote event 40000 Wrote event 41000 Wrote event 42000 Wrote event 43000 Wrote event 44000 Wrote event 45000 Wrote event 46000 Wrote event 47000 Wrote event 48000 Wrote event 49000 Wrote event 50000 Wrote 50000 events to b1_pi.hddm Creating control.in file ... Running hdgeant4 ... hdgeant4 run.mac ************************************************************* Geant4 version Name: geant4-10-02-patch-02 [MT] (17-June-2016) << in Multi-threaded mode >> Copyright : Geant4 Collaboration Reference : NIM A 506 (2003), 250-303 WWW : http://cern.ch/geant4 ************************************************************* JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:30480 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>comment: Variation for simulations with data conditions JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1350A_poisson_20160222 ... Nx=221 Ny=1 Nz=701 ) at 0x4b5c2f0 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1350A_poisson_20160222 rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 JANA >>154921 entries found (Creating DGeometry: JANA >> Run requested:30480 found:30480 JANA >> Run validity range: 30480-30480 JANA >> URL="ccdb:///GEOMETRY/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 25 material maps in calib. DB JANA >>Read in 25 material maps for run 30480 containing 76153 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0x51ecc00 Initializing the Geant4 kernel... Root geometry volume SITE::1 configured as World In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 STC: ALL parameters loaded from ccdb CDC: ALL parameters loaded from ccdb FDC: ALL parameters loaded from ccdb BCAL: ALL parameters loaded from ccdb FTOF: ALL parameters loaded from ccdb FCAL: ALL parameters loaded from ccdb Additional geometry layer configured as ParallelWorld1 Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definition. G4PhysicsListHelper::AddTransportation()--- G4CoupledTransportation is used New QGSP_FTFP_BERT physics list, replaces LEP with FTF/P for p/n/pi (/K?) Thresholds: 1) between BERT and FTF/P over the interval 6 to 8 GeV. 2) between FTF/P and QGS/P over the interval 12 to 25 GeV. -- quasiElastic was asked to be 1 Changed to 1 for QGS and to 0 (must be false) for FTF G4WT0 > G4WT0 > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ G4WT0 > Local thread RunManagerKernel version Name: geant4-10-02-patch-02 [MT] G4WT0 > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ G4WT0 > G4WT0 > Opened input file: b1_pi.hddm G4WT0 > In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 G4WT0 > Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definition. G4WT0 > G4PhysicsListHelper::AddTransportation()--- G4CoupledTransportation is used G4WT0 > New QGSP_FTFP_BERT physics list, replaces LEP with FTF/P for p/n/pi (/K?) Thresholds: G4WT0 > 1) between BERT and FTF/P over the interval 6 to 8 GeV. G4WT0 > 2) between FTF/P and QGS/P over the interval 12 to 25 GeV. G4WT0 > -- quasiElastic was asked to be 1 G4WT0 > Changed to 1 for QGS and to 0 (must be false) for FTF G4WT0 > JCalibration context: variation=mc G4WT0 > JCalibration context: variation=mc G4WT0 > Info: RF reference plane set to 65 cm. G4WT0 > New event 0 with starting seeds 960416608, 2004255418 =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== Thread 2 (Thread 0x7fb1b49ee700 (LWP 40944)): #0 0x00007fb1bf5a9469 in waitpid () at /lib64/libc.so.6 #1 0x00007fb1bf526f12 in do_system () at /lib64/libc.so.6 #2 0x00007fb1bf5272c1 in system () at /lib64/libc.so.6 #3 0x00007fb1c868aae9 in TUnixSystem::StackTrace() (this=0x370c100) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #4 0x00007fb1c868d3bc in TUnixSystem::DispatchSignals(ESignals) (this=0x370c100, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:3625 #5 0x00007fb1c457c5f0 in () at /lib64/libpthread.so.0 #6 0x00007fb1d21834c5 in GlueXPhotonBeamGenerator::GenerateTaggerHit(G4Event const*, double, double, int) (this=0x0, event=event entry=0x7fb1a11e13b0, energy=0, time=9.532824124368238e-130, time entry=-8.0160320639999973, bg=bg entry=0) at src/GlueXPhotonBeamGenerator.cc:618 #7 0x00007fb1d219d6f6 in GlueXPrimaryGeneratorAction::GeneratePrimariesHDDM(G4Event*) (this=0x7fb1ac1069b0, anEvent=0x7fb1a11e13b0) at src/GlueXPrimaryGeneratorAction.cc:900 #8 0x00007fb1ce24422d in G4WorkerRunManager::GenerateEvent(int) (this=0x7fb1ac072970, i_event=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:376 #9 0x00007fb1ce24225d in G4WorkerRunManager::ProcessOneEvent(int) (this=0x7fb1ac072970, i_event=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:250 #10 0x00007fb1ce2423f9 in G4WorkerRunManager::DoEventLoop(int, char const*, int) (this=0x7fb1ac072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:231 #11 0x00007fb1ce2369ee in G4RunManager::BeamOn(int, char const*, int) (this=0x7fb1ac072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:273 #12 0x00007fb1ce243181 in G4WorkerRunManager::DoWork() (this=0x7fb1ac072970) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:619 #13 0x00007fb1ce24ce54 in G4MTRunManagerKernel::StartThread(void*) (context=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManagerKernel.cc:191 #14 0x00007fb1c4574e65 in start_thread () at /lib64/libpthread.so.0 #15 0x00007fb1bf5e288d in clone () at /lib64/libc.so.6 Thread 1 (Thread 0x7fb1d2b6c9c0 (LWP 39145)): #0 0x00007fb1c45789f5 in pthread_cond_wait GLIBC_2.3.2 () at /lib64/libpthread.so.0 #1 0x00007fb1ce23e387 in G4MTRunManager::WaitForEndEventLoopWorkers() (this=0x7ffc7f80e7e0) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManager.cc:797 #2 0x00007fb1ce24157d in G4MTRunManager::RunTermination() (this=0x7ffc7f80e7e0) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManager.cc:393 #3 0x00007fb1ce2369f7 in G4RunManager::BeamOn(int, char const*, int) (this=0x7ffc7f80e7e0, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:274 #4 0x00007fb1ce24e69c in G4RunMessenger::SetNewValue(G4UIcommand*, G4String) (this=0x3a42c90, command=command entry=0x3a43100, newValue=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunMessenger.cc:376 #5 0x00007fb1ca9fdd15 in G4UIcommand::DoIt(G4String) (this=this entry=0x3a43100, parameterList=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcommand.cc:230 #6 0x00007fb1caa15df8 in G4UImanager::ApplyCommand(char const*) (this=0x37d3320, aCmd=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:523 #7 0x00007fb1caa168a8 in G4UImanager::ApplyCommand(G4String const&) (this=, aCmd=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:441 #8 0x00007fb1ca9ee30d in G4UIbatch::ExecCommand(G4String const&) (this=this entry=0x83a53f0, command=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIbatch.cc:170 #9 0x00007fb1ca9ef9ab in G4UIbatch::SessionStart() (this=0x83a53f0) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIbatch.cc:215 #10 0x00007fb1caa110a3 in G4UImanager::ExecuteMacroFile(char const*) (this=this entry=0x37d3320, fileName=0x83a53d8 "run.mac") at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:296 #11 0x00007fb1caa074f9 in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String) (this=0x37d3730, command=command entry=0x37d3e30, newValue=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcontrolMessenger.cc:313 #12 0x00007fb1ca9fdd15 in G4UIcommand::DoIt(G4String) (this=this entry=0x37d3e30, parameterList=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcommand.cc:230 #13 0x00007fb1caa15df8 in G4UImanager::ApplyCommand(char const*) (this=this entry=0x37d3320, aCmd=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:523 #14 0x00007fb1caa168a8 in G4UImanager::ApplyCommand(G4String const&) (this=this entry=0x37d3320, aCmd=...) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:441 #15 0x00007fb1d15d2c2e in main(int, char**) (argc=2, argv=0x7ffc7f810a08) at src/hdgeant4.cc:230 #16 0x00007fb1bf506505 in __libc_start_main () at /lib64/libc.so.6 #17 0x0000000000684977 in _start () =========================================================== The lines below might hint at the cause of the crash. You may get help by asking at the ROOT forum http://root.cern.ch/forum. Only if you are really convinced it is a bug in ROOT then please submit a report at http://root.cern.ch/bugs. Please post the ENTIRE stack trace from above as an attachment in addition to anything else that might help us fixing this issue. =========================================================== #6 0x00007fb1d21834c5 in GlueXPhotonBeamGenerator::GenerateTaggerHit(G4Event const*, double, double, int) (this=0x0, event=event entry=0x7fb1a11e13b0, energy=0, time=9.532824124368238e-130, time entry=-8.0160320639999973, bg=bg entry=0) at src/GlueXPhotonBeamGenerator.cc:618 #7 0x00007fb1d219d6f6 in GlueXPrimaryGeneratorAction::GeneratePrimariesHDDM(G4Event*) (this=0x7fb1ac1069b0, anEvent=0x7fb1a11e13b0) at src/GlueXPrimaryGeneratorAction.cc:900 #8 0x00007fb1ce24422d in G4WorkerRunManager::GenerateEvent(int) (this=0x7fb1ac072970, i_event=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:376 #9 0x00007fb1ce24225d in G4WorkerRunManager::ProcessOneEvent(int) (this=0x7fb1ac072970, i_event=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:250 #10 0x00007fb1ce2423f9 in G4WorkerRunManager::DoEventLoop(int, char const*, int) (this=0x7fb1ac072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:231 #11 0x00007fb1ce2369ee in G4RunManager::BeamOn(int, char const*, int) (this=0x7fb1ac072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:273 #12 0x00007fb1ce243181 in G4WorkerRunManager::DoWork() (this=0x7fb1ac072970) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:619 #13 0x00007fb1ce24ce54 in G4MTRunManagerKernel::StartThread(void*) (context=) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManagerKernel.cc:191 #14 0x00007fb1c4574e65 in start_thread () at /lib64/libpthread.so.0 #15 0x00007fb1bf5e288d in clone () at /lib64/libc.so.6 =========================================================== Running mcsmear ... mcsmear -PJANA:BATCH_MODE=1 -PTHREAD_TIMEOUT=500 hdgeant.hddm JANA >> Enabling z compression of output HDDM file stream (default) JANA >> Enabling CRC data integrity check in output HDDM file stream JANA >>Opening source "hdgeant.hddm" of type: HDDM JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >>Installing special signal handler for mcsmear... JANA >> JANA >>No more event sources JANA >>Thread 0x7fe940d8e700 completed gracefully: Mon Aug 10 08:02:55 2020 JANA >>Merging thread 0 (0x7fe940d8e700) ... Closed HDDM file 0 event written to hdgeant_smeared.hddm JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Running hd_root with danarest ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=danarest hdgeant_smeared.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/halld_recon/Linux_CentOS7.7-x86_64-gcc4.8.5/plugins/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >>Opening source "hdgeant_smeared.hddm" of type: HDDM JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>No more event sources JANA >>Thread 0x7f2ac8fe6700 completed gracefully: Mon Aug 10 08:02:56 2020 JANA >>Merging thread 0 (0x7f2ac8fe6700) ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Running hd_root with b1pi_hists & monitoring_hists ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/halld_recon/Linux_CentOS7.7-x86_64-gcc4.8.5/plugins/b1pi_hists.so" ... JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/halld_recon/Linux_CentOS7.7-x86_64-gcc4.8.5/plugins/monitoring_hists.so" ... Opened ROOT file "hd_root.root" ... JANA >> JANA >>Telling all threads to quit ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "dana_rest.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! xxxxxxxxxxxx JANA ERROR>> JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... JANA >>Closing shared object handle 1 ... Exit code: 66 Create plots root -b -q mk_pics.C ------------------------------------------------------------ | Welcome to ROOT 6.08/06 http://root.cern.ch | | (c) 1995-2016, The ROOT Team | | Built for linuxx8664gcc | | From tag v6-08-06, 2 March 2017 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... #0 0x00007f7e6627841c in waitpid () from /lib64/libc.so.6 #1 0x00007f7e661f5f12 in do_system () from /lib64/libc.so.6 #2 0x00007f7e6727bae9 in TUnixSystem::StackTrace (this=0x190a8e0) at /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #3 0x00007f7e62b91ac5 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #4 0x00007f7e62b91438 in cling_runtime_internal_throwIfInvalidPointer () from /u/group/halld/Software/builds/Linux_CentOS7.7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #5 0x00007f7e679b54ae in ?? () #6 0x00007fffb4f0aea0 in ?? () #7 0x0000000001d5bb50 in ?? () #8 0x0000000000000000 in ?? () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments Save test data python update_db.py Traceback (most recent call last): File "update_db.py", line 28, in with open("data.txt") as f: IOError: [Errno 2] No such file or directory: 'data.txt' #count events #count b1_pi.hddm #count hdgeant.hddm #count hdgeant_smeared.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 44: hddm_counter.pl: command not found /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 45: hddm_counter.pl: command not found /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 46: hddm_counter.pl: command not found /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 47: hddm_counter.pl: command not found #count dana_rest.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 48: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/Run30480’ cp: cannot stat ‘*.pdf’: No such file or directory cp: cannot stat ‘*.gif’: No such file or directory ‘index.html’ -> ‘/group/halld/www/halldweb/html/b1pi/2020-08-10/Linux_CentOS7.7-x86_64-gcc4.8.5/Run30480/index.html’