Difference between revisions of "GlueX Offline Software"

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'''News:'''
 
'''News:'''
* February 3, 2021: [[GlueX_Software_Meeting,_September_15,_2020#Minutes|Minutes of the February 2nd Software Meeting]] are available.
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* July 19, 2022: [[GlueX_Software_Meeting,_July_18,_2022#Minutes|Minutes of the July 18th Software Meeting]] are available
* January 26, 2021: [[HDGeant4 Meeting, January 26, 2021#Minutes|Minutes of the January 26th HDGeant4 Meeting]] are available.
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* July 12, 2022: [https://halldweb.jlab.org/halld_versions/version_5.8.0.xml New version set: 5.8.0].
* September 23, 2020: [https://mailman.jlab.org/pipermail/halld-offline/2020-September/008329.html New version set: 4.28.0]
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* June 7, 2022: [[GlueX_Software_Meeting,_June_6,_2022#Minutes|Minutes of the June 6th Software Meeting]] are available
* December 4, 2020: [https://mailman.jlab.org/pipermail/halld-offline/2020-December/008394.html New Required RPMs]
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* May 23, 2022" [https://halldweb.jlab.org/wiki/index.php/GlueX_Tutorial_2022 GlueX Software and Analysis Tutorial 2022]
* September 26, 2020: [[HDGeant4 Meeting, September 22, 2020#Minutes|Minutes of the September 22nd HDGeant4 meeting]] are available.
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* May 19, 2022: [https://mailman.jlab.org/pipermail/halld-offline/2022-May/008816.html New version set: 5.7.1].
* September 24, 2020: [[GlueX_Software_Meeting,_September_15,_2020#Minutes|Minutes of the September 15th Software meeting]] are available.
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* September 23, 2020: [https://mailman.jlab.org/pipermail/halld-offline/2020-September/008329.html New version set: 4.28.0]
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* [[Offline Software News Archive|Previous news items...]]
 
* [[Offline Software News Archive|Previous news items...]]
 
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'''Quick Links:'''
 
'''Quick Links:'''
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* [https://scicomptest.jlab.org/scicomp/tapeFile Listing of files missing from the tape library]
 
* [[GlueX Offline FAQ|Frequently Asked Questions]]
 
* [[GlueX Offline FAQ|Frequently Asked Questions]]
 
* [[Offline HOWTO List|HOWTO List]]
 
* [[Offline HOWTO List|HOWTO List]]
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Documentation for software packages specific to GlueX or to JLab.
 
Documentation for software packages specific to GlueX or to JLab.
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* Best practices in writing code for the HallD/GlueX software environment check out this link of [[Coding Conventions| '''''HallD/GlueX Coding Conventions''''']]
 +
* A convenient way to enhance the impact of comments inside the code is to use [https://halldweb.jlab.org/talks/2021/usedoxy.pdf '''''Doxygen''''']. The hooks and infrastructures are already implemented for the packages ''halld_recon'' and ''halld_sim''.
 +
*[[Documentation Initiative]]
  
 
====Software Packages====
 
====Software Packages====
  
* [http://amptools.sourceforge.net/index.php/Main_Page AmpTools]: Amplitude analysis package (aka partial wave analysis)
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* [https://github.com/mashephe/AmpTools AmpTools]: Amplitude analysis package (aka partial wave analysis)
 
* [[Calibration Database|CCDB]]: Calibration Database
 
* [[Calibration Database|CCDB]]: Calibration Database
 
** [[Policy on CCDB Variations for Reconstructing Simulated Data]]
 
** [[Policy on CCDB Variations for Reconstructing Simulated Data]]
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**[https://halldweb.jlab.org/gluex_sim/Dashboard.html '''Active Sample Dashboard''']
 
**[https://halldweb.jlab.org/gluex_sim/Dashboard.html '''Active Sample Dashboard''']
 
**[https://halldweb.jlab.org/gluex_sim/SubmitSim.html '''MC Submission Form''']
 
**[https://halldweb.jlab.org/gluex_sim/SubmitSim.html '''MC Submission Form''']
* [https://pypwa.jlab.org/index.html PyPWA]
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* [https://pypwa.jlab.org/index.html PyPWA:] [https://pypwa.readthedocs.io/ Python-based Partial Wave Analysis Toolkit]
 
* [https://github.com/JeffersonLab/rcdb/wiki RCDB]: Run Conditions Database
 
* [https://github.com/JeffersonLab/rcdb/wiki RCDB]: Run Conditions Database
 
** [https://halldweb.jlab.org/rcdb/ Web Interface]
 
** [https://halldweb.jlab.org/rcdb/ Web Interface]
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* [[Computing Services and Servers|Hall D and JLab Servers]]: Web servers, database servers, etc.
 
* [[Computing Services and Servers|Hall D and JLab Servers]]: Web servers, database servers, etc.
 
* [https://cc.jlab.org/ Computer Center]
 
* [https://cc.jlab.org/ Computer Center]
* [https://scicomp.jlab.org/scicomp/ Scientific Computing]
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* [https://scicomptest.jlab.org/scicomp/ Scientific Computing]
 
** [https://scicomp.jlab.org/scicomp/#/auger/jobs Farm Job Status] Auger job status from SciComp
 
** [https://scicomp.jlab.org/scicomp/#/auger/jobs Farm Job Status] Auger job status from SciComp
 
*** [https://halldweb.jlab.org/cgi-bin/jproj_status.pl jproj Job Status] Status of jobs using the jproj system
 
*** [https://halldweb.jlab.org/cgi-bin/jproj_status.pl jproj Job Status] Status of jobs using the jproj system
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** [https://scicomp.jlab.org/scicomp/#/disk/work Work]
 
** [https://scicomp.jlab.org/scicomp/#/disk/work Work]
 
*** [https://halldweb.jlab.org/disk_management/work_report.html /work/halld leader board]
 
*** [https://halldweb.jlab.org/disk_management/work_report.html /work/halld leader board]
*** [https://halldweb.jlab.org/disk_management/work3_report.html /work/halld3 leader board]
 
 
* [[GlueX-related shared accounts on the JLab CUE]]
 
* [[GlueX-related shared accounts on the JLab CUE]]
 
* [[Hall D MySQL/MariaDB Servers and Replication Relationship]]: a list of database servers
 
* [[Hall D MySQL/MariaDB Servers and Replication Relationship]]: a list of database servers
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** [https://mailman.jlab.org/pipermail/halld-offline/2017-June/002827.html Using the Grid with Containers]
 
** [https://mailman.jlab.org/pipermail/halld-offline/2017-June/002827.html Using the Grid with Containers]
 
** [[Using the Grid]]
 
** [[Using the Grid]]
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** [[Updating Oasis for the GlueX VO]]
 
** [https://halldweb.jlab.org/talks/2011-2Q/gridmake-6-2011.ppt Gridmake]
 
** [https://halldweb.jlab.org/talks/2011-2Q/gridmake-6-2011.ppt Gridmake]
  
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* [https://data.jlab.org/drupal/?q=system/files/Offline%20Plan%20FY10.pdf JLab Offline Computing Plan, FY2010]
 
* [https://data.jlab.org/drupal/?q=system/files/Offline%20Plan%20FY10.pdf JLab Offline Computing Plan, FY2010]
 
* [[Role of the Software Coordinator]]
 
* [[Role of the Software Coordinator]]
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=== Containers ===
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* [[GlueX and Containers]]: an overview of the use of containers in GlueX
  
 
==Meetings and Reviews==
 
==Meetings and Reviews==
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==Communication and Help==
 
==Communication and Help==
  
* [https://groups.google.com/forum/#!forum/gluex-software Google Group for GlueX Software]
 
**[[GlueX-Related Google Groups|Help on GlueX-related Google Groups]]
 
* [https://mailman.jlab.org/pipermail/halld-offline/2016-April/002297.html GlueX Software Help Email List]: Ask a question!
 
 
* Offline Software Email List: announcements and discussion
 
* Offline Software Email List: announcements and discussion
 
** [mailto:halld-offline@jlab.org Send email to the list]
 
** [mailto:halld-offline@jlab.org Send email to the list]
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** [https://www.google.com/cse/publicurl?cx=001547825138043056762:dydinmymrvu Google search of archive]
 
** [https://www.google.com/cse/publicurl?cx=001547825138043056762:dydinmymrvu Google search of archive]
 
** [https://mailman.jlab.org/mailman/listinfo/halld-offline Information page] (subscribe, unsubscribe, list members, etc.)
 
** [https://mailman.jlab.org/mailman/listinfo/halld-offline Information page] (subscribe, unsubscribe, list members, etc.)
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* [https://groups.google.com/forum/#!forum/gluex-software Google Group for GlueX Software]
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**[[GlueX-Related Google Groups|Help on GlueX-related Google Groups]]
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** [https://mailman.jlab.org/pipermail/halld-offline/2016-April/002297.html Original announcement]
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* [https://slack.com/ Slack]
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** Chat application using the workspace '''jlab12gev'''
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** Click [https://jlab12gev.slack.com/signup here] to join. You must use your JLab email address.
 
* [[Email Lists#Simple Email Lists|Simple Email Lists]]: get notifications from automated tests
 
* [[Email Lists#Simple Email Lists|Simple Email Lists]]: get notifications from automated tests
 
* [[GlueX_Communications|Communication Instructions]]: Guides to communication systems used by GlueX
 
* [[GlueX_Communications|Communication Instructions]]: Guides to communication systems used by GlueX

Revision as of 10:53, 20 July 2022

News:

Quick Links:

The legacy version of this page is here.

General Information

Build Scripts: A Version Management System for GlueX describes a standard directory structure for GlueX software, how to create complete or partial builds, and how to specify versions of individual packages, both for building and for use. It is also available as GlueX Note 2793.

See below for other helpful links.

Shell Environment Set-Up

Building GlueX Software

GlueX and Containers

Software Documentation

Packages used in the GlueX software stack with links to package-specific documentation.

GlueX Software

Documentation for software packages specific to GlueX or to JLab.

  • Best practices in writing code for the HallD/GlueX software environment check out this link of HallD/GlueX Coding Conventions
  • A convenient way to enhance the impact of comments inside the code is to use Doxygen. The hooks and infrastructures are already implemented for the packages halld_recon and halld_sim.
  • Documentation Initiative

Software Packages

Special Topics

  1. Material on Splitoffs

Documentation for External Software Packages

Documentation on additional software packages used by GlueX. Development and maintenance of these are not directly related to GlueX.

Data Sets

Offline Data Monitoring

Computing Facilities

JLab

Grid

Off-Site Computing Resources

Software Management

Source Code Management

Testing and Debugging

Governance, Conventions, Standard Practices

Containers

Meetings and Reviews

Communication and Help

FAQ

Legacy Links