Difference between revisions of "GlueX Offline Software"

From GlueXWiki
Jump to: navigation, search
(38 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 +
{| border
 +
|-
 +
|
 
'''News:'''
 
'''News:'''
 
+
* February 10, 2018: [[GlueX_Offline_Meeting,_February_9,_2018#Minutes|Minutes of the February 9 Offline Meeting are available]]
* February 5, 2017: [[GlueX_Offline_Meeting,_February_1,_2017#Minutes|Minutes from the February 1st Meeting]] are available.
+
* February 7, 2018: [https://mailman.jlab.org/pipermail/halld-offline/2018-February/003106.html New sim-recon release: version 2.23.0]
* February 5, 2017: [https://mailman.jlab.org/pipermail/halld-offline/2017-February/002611.html Short-term advantage to switching to centos7]
+
* February 2, 2018: [https://mailman.jlab.org/pipermail/halld-offline/2018-February/003090.html New releases: build_scripts 1.26, rcdb 0.03, sqlitecpp 2.2.0, sim-recon 2.26.0, hdgeant4 1.6.0]
* January 24, 2017: [https://mailman.jlab.org/pipermail/halld-offline/2017-January/002601.html New patch release of sim-recon: 2.11.1]
+
* January 26, 2018: [[GlueX_Offline_Meeting,_January_26,_2018#Minutes|Minutes of the January 26 Offline Meeting are available]]
* January 19, 2017: [https://mailman.jlab.org/pipermail/halld-offline/2017-January/002595.html Recovery work on Lustre files complete].
+
* January 5, 2017: [http://argus.phys.uregina.ca/cgi-bin/private/DocDB/ShowDocument?docid=3189 Draft report from the software review committee] available.
+
 
* [[Offline Software News Archive|Previous news items...]]
 
* [[Offline Software News Archive|Previous news items...]]
 +
|
 +
'''Quick Links:'''
 +
* [https://github.com/orgs/JeffersonLab/teams/gluex/repositories Repositories on GitHub]
 +
* [[GlueX Offline FAQ|Frequently Asked Questions]]
 +
* [https://mailman.jlab.org/pipermail/halld-offline/ halld-offline@jlab.org Email List Archive]
 +
* [https://groups.google.com/forum/#!forum/gluex-software GlueX Software Help Google Group]
 +
* [[GlueX Offline Software Meetings]]
 +
|}
  
 
The legacy version of this page is [[Offline Software|here]].
 
The legacy version of this page is [[Offline Software|here]].
Line 12: Line 21:
 
==General Information==
 
==General Information==
  
[https://halldweb.jlab.org/docs/gluex_build_web/ A Version Management System for GlueX] describes a standard directory structure for GlueX software, how to create complete or partial builds, and how to specify versions of individual packages, both for building and for use. It is also available as [http://argus.phys.uregina.ca/cgi-bin/public/DocDB/ShowDocument?docid=2793 GlueX Note 2793].
+
[https://halldweb.jlab.org/docs/gluex_build_web/ A Version Management System for GlueX] describes a standard directory structure for GlueX software, how to create complete or partial builds, and how to specify versions of individual packages, both for building and for use. It is also available as [https://halldweb.jlab.org/doc-public/DocDB/ShowDocument?docid=2793 GlueX Note 2793].
  
 
See below for other helpful links.
 
See below for other helpful links.
Line 22: Line 31:
 
===Building GlueX Software===
 
===Building GlueX Software===
  
 +
* [[Building_Private_Versions_of_GlueX_Software:_my_sim-recon.sh|Building private versions of GlueX software]]
 
* [https://halldweb.jlab.org/docs/gluex_build_web/node34.html Scripts for Installing GlueX Software]: Do a complete build of all standard components of GlueX software or add new versions to an existing build tree.
 
* [https://halldweb.jlab.org/docs/gluex_build_web/node34.html Scripts for Installing GlueX Software]: Do a complete build of all standard components of GlueX software or add new versions to an existing build tree.
 
* [[Hall D Package Manager|hdpm - Hall D Package Manager]]: A package manager for Hall-D software, which provides an alternative method for installing GlueX software.
 
* [[Hall D Package Manager|hdpm - Hall D Package Manager]]: A package manager for Hall-D software, which provides an alternative method for installing GlueX software.
 
* [[Legacy Build Instructions]]: Guides to various aspects of the build process. Up-to-date-ness may vary.
 
* [[Legacy Build Instructions]]: Guides to various aspects of the build process. Up-to-date-ness may vary.
 +
* [https://halldweb.jlab.org/wiki/index.php/Building_Private_Versions_of_GlueX_Software:_my_sim-recon.sh Building private versions of GlueX software]
  
 
==Software Documentation==
 
==Software Documentation==
Line 42: Line 53:
 
* HDDS: Detector geometry specification
 
* HDDS: Detector geometry specification
 
** [https://halldsvn.jlab.org/repos/trunk/hdds/HDDS-1_1.xsd HDDS Schema]: Includes description of the HDDS mark-up language.
 
** [https://halldsvn.jlab.org/repos/trunk/hdds/HDDS-1_1.xsd HDDS Schema]: Includes description of the HDDS mark-up language.
** [http://argus.phys.uregina.ca/cgi-bin/public/DocDB/ShowDocument?docid=64 Geometry Specification for Hall D]: General Description and Philosophy, September 2003
+
** [https://halldweb.jlab.org/doc-public/DocDB/ShowDocument?docid=64 Geometry Specification for Hall D]: General Description and Philosophy, September 2003
** [http://argus.phys.uregina.ca/cgi-bin/public/DocDB/ShowDocument?docid=654 Detector Models for GlueX Monte Carlo Simulation: A Status Report], June 2006
+
** [https://halldweb.jlab.org/doc-public/DocDB/ShowDocument?docid=654 Detector Models for GlueX Monte Carlo Simulation: A Status Report], June 2006
** [http://argus.phys.uregina.ca/cgi-bin/public/DocDB/ShowDocument?docid=732 Detector Models for GlueX Monte Carlo Simulation: the CD2 Baseline], January 2007
+
** [https://halldweb.jlab.org/doc-public/DocDB/ShowDocument?docid=732 Detector Models for GlueX Monte Carlo Simulation: the CD2 Baseline], January 2007
 
** [[HDDS Tagged Releases]]
 
** [[HDDS Tagged Releases]]
 
* [[HDDM Programmer's Interface|HDDM]]: The Hall D Data Model, a compact xml-based format for event-based data.
 
* [[HDDM Programmer's Interface|HDDM]]: The Hall D Data Model, a compact xml-based format for event-based data.
Line 51: Line 62:
 
** [[Policy on CCDB Variations for Reconstructing Simulated Data]]
 
** [[Policy on CCDB Variations for Reconstructing Simulated Data]]
 
* [https://github.com/JeffersonLab/rcdb/wiki RCDB]: Run Conditions Database
 
* [https://github.com/JeffersonLab/rcdb/wiki RCDB]: Run Conditions Database
 +
** [[GlueX Implementation of the RCDB]]
 
* [http://amptools.sourceforge.net/index.php/Main_Page AmpTools]: Amplitude analysis package (aka partial wave analysis)
 
* [http://amptools.sourceforge.net/index.php/Main_Page AmpTools]: Amplitude analysis package (aka partial wave analysis)
 
* [https://github.com/sdobbs/HDEventStore EventStore]: a package for managing and deploying data files and event lists
 
* [https://github.com/sdobbs/HDEventStore EventStore]: a package for managing and deploying data files and event lists
Line 114: Line 126:
 
** [https://scicomp.jlab.org/scicomp/#/disk/work Work]
 
** [https://scicomp.jlab.org/scicomp/#/disk/work Work]
 
*** [https://halldweb.jlab.org/disk_management/work_report.html /work/halld leader board]
 
*** [https://halldweb.jlab.org/disk_management/work_report.html /work/halld leader board]
*** [https://halldweb.jlab.org/disk_management/work2_report.html /work/halld2 leader board]
 
 
* [[GlueX-related shared accounts on the JLab CUE]]
 
* [[GlueX-related shared accounts on the JLab CUE]]
 
* [[Hall D MySQL/MariaDB Servers and Replication Relationship]]: a list of database servers
 
* [[Hall D MySQL/MariaDB Servers and Replication Relationship]]: a list of database servers
Line 121: Line 132:
  
 
* [http://www.opensciencegrid.org/ Open Science Grid]
 
* [http://www.opensciencegrid.org/ Open Science Grid]
 +
** [https://mailman.jlab.org/pipermail/halld-offline/2017-June/002827.html Using the Grid with Containers]
 
** [[Using the Grid]]
 
** [[Using the Grid]]
 
** [https://halldweb.jlab.org/talks/2011-2Q/gridmake-6-2011.ppt Gridmake]
 
** [https://halldweb.jlab.org/talks/2011-2Q/gridmake-6-2011.ppt Gridmake]
Line 154: Line 166:
 
* [[GlueX Cron Jobs]]
 
* [[GlueX Cron Jobs]]
 
* [[Data Challenges]]: Large-scale tests of computing infrastructure
 
* [[Data Challenges]]: Large-scale tests of computing infrastructure
* [http://argus.phys.uregina.ca/cgi-bin/public/DocDB/ShowDocument?docid=2808 Data Management Plan for Hall D]: Long-term preservation of data and data-analysis tools
+
* [https://halldweb.jlab.org/doc-public/DocDB/ShowDocument?docid=2808 Data Management Plan for Hall D]: Long-term preservation of data and data-analysis tools
 
* [https://data.jlab.org/drupal/?q=system/files/Offline%20Plan%20FY10.pdf JLab Offline Computing Plan, FY2010]
 
* [https://data.jlab.org/drupal/?q=system/files/Offline%20Plan%20FY10.pdf JLab Offline Computing Plan, FY2010]
 
* [[Role of the Software Coordinator]]
 
* [[Role of the Software Coordinator]]
Line 203: Line 215:
 
## [[Geometry]]
 
## [[Geometry]]
 
## [[Magnetic Field Maps for Solenoid]]
 
## [[Magnetic Field Maps for Solenoid]]
## [http://argus.phys.uregina.ca/cgi-bin/public/DocDB/ShowDocument?docid=473 The Build Management System (BMS)]
+
## [https://halldweb.jlab.org/doc-public/DocDB/ShowDocument?docid=473 The Build Management System (BMS)]
 
## [[Reconstruction Software]]
 
## [[Reconstruction Software]]
 
## [[Deprecated Software Links]]
 
## [[Deprecated Software Links]]
Line 213: Line 225:
 
# [[2013 Software Review]]
 
# [[2013 Software Review]]
 
# [[2012 Software Review]]
 
# [[2012 Software Review]]
# [http://argus.phys.uregina.ca/cgi-bin/private/DocDB/ShowDocument?docid=1782 IT in the 12-GeV Era: close-out slides]
+
# [https://halldweb.jlab.org/doc-private/DocDB/ShowDocument?docid=1782 IT in the 12-GeV Era: close-out slides]
 
# [[Geometries for 2008 DC Review]]
 
# [[Geometries for 2008 DC Review]]
 
# [[Tracking resolution estimator (REZEST)]]
 
# [[Tracking resolution estimator (REZEST)]]

Revision as of 14:27, 13 February 2018

News:

Quick Links:

The legacy version of this page is here.

General Information

A Version Management System for GlueX describes a standard directory structure for GlueX software, how to create complete or partial builds, and how to specify versions of individual packages, both for building and for use. It is also available as GlueX Note 2793.

See below for other helpful links.

Shell Environment Set-Up

Building GlueX Software

Software Documentation

GlueX Software

Documentation for software systems closely related to GlueX.

Software Packages

Special Topics

Documentation for External Software Packages

Documentation on additional software packages used by GlueX. Development and maintenance of these are not directly related to GlueX.

Data Sets

Offline Data Monitoring

Computing Facilities

JLab

Grid

Other Computing Resources

Software Management

Source Code Management

Testing and Debugging

Governance, Conventions, Standard Practices

Meetings and Reviews

Communication and Help

FAQ

Legacy Links

Uncategorized Links

  1. Offline Software Topics
    1. GEANT 3 manual
    2. osrelease.pl script
    3. Software Task List
    4. JANA/DANA
    5. Simulation Software
    6. Geometry
    7. Magnetic Field Maps for Solenoid
    8. The Build Management System (BMS)
    9. Reconstruction Software
    10. Deprecated Software Links
  2. Offline Projects
  3. Material on Splitoffs
  4. EVO
  5. GlueX Communications More on ESNET,EVO ...
  6. Private:Using VNC
  7. 2013 Software Review
  8. 2012 Software Review
  9. IT in the 12-GeV Era: close-out slides
  10. Geometries for 2008 DC Review
  11. Tracking resolution estimator (REZEST)
  12. Installing HDDS-to-GEANT4 converter
  13. Duties of the GlueX Software Coordinator
  14. ded
  15. Action Items
  16. Action Items Archive
  17. Hall D and JLab Servers: Web servers, database servers, etc.