Difference between revisions of "GlueX Offline Software"

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'''News:'''
 
'''News:'''
* October 7, 2021: [https://mailman.jlab.org/pipermail/halld-offline/2021-October/008655.html Advanced support versions, bug fixes, and a new version set: 5.0.1]
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* July 19, 2022: [[GlueX_Software_Meeting,_July_18,_2022#Minutes|Minutes of the July 18th Software Meeting]] are available
* October 6, 2021: [https://mailman.jlab.org/pipermail/halld-offline/2021-October/008654.html Doxygen sites for halld_recon and halld_sim]
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* July 12, 2022: [https://halldweb.jlab.org/halld_versions/version_5.8.0.xml New version set: 5.8.0].
* October 4, 2021: [[HDGeant4 Meeting, October 4, 2021#Minutes|Minutes of the October 4th HDGeant4 Meeting]] are available.
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* June 7, 2022: [[GlueX_Software_Meeting,_June_6,_2022#Minutes|Minutes of the June 6th Software Meeting]] are available
* September 28, 2021: [[GlueX_Software_Meeting,_September 27,_2021#Minutes|Minutes of the September 27th Software Meeting]] are available.
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* May 23, 2022" [https://halldweb.jlab.org/wiki/index.php/GlueX_Tutorial_2022 GlueX Software and Analysis Tutorial 2022]
* September 26, 2021: [https://mailman.jlab.org/pipermail/halld-offline/2021-September/008645.html Software Meeting, New time and day, Mon. Sep. 27, 9:30 am]
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* May 19, 2022: [https://mailman.jlab.org/pipermail/halld-offline/2022-May/008816.html New version set: 5.7.1].
 
* [[Offline Software News Archive|Previous news items...]]
 
* [[Offline Software News Archive|Previous news items...]]
 
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===Shell Environment Set-Up===
 
===Shell Environment Set-Up===
  
* [[Setting Up the GlueX Environment]]
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* [https://halldweb.jlab.org/docs/build_scripts_web/node6.html#SECTION00062400000000000000 Simple Environment Set Up]
  
 
===Building GlueX Software===
 
===Building GlueX Software===
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* [https://github.com/JeffersonLab/hd_singularity Package for Building Singularity Containers]
 
* [https://github.com/JeffersonLab/hd_singularity Package for Building Singularity Containers]
 
* [[GlueX Containers Meetings]]
 
* [[GlueX Containers Meetings]]
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* [[HOWTO use the GlueX Singularity Container]]
  
 
==Software Documentation==
 
==Software Documentation==
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Documentation for software packages specific to GlueX or to JLab.
 
Documentation for software packages specific to GlueX or to JLab.
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* A brief overview of the GlueX-specific software can be found [[ Software | here ]]
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* Best practices in writing code for the HallD/GlueX software environment check out this link of [[Coding Conventions| '''''HallD/GlueX Coding Conventions''''']]
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* A convenient way to enhance the impact of comments inside the code is to use [https://halldweb.jlab.org/talks/2021/usedoxy.pdf '''''Doxygen''''']. The hooks and infrastructures are already implemented for the packages ''halld_recon'' and ''halld_sim''.
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* [[Documentation Initiative]]
  
 
====Software Packages====
 
====Software Packages====
  
* [http://amptools.sourceforge.net/index.php/Main_Page AmpTools]: Amplitude analysis package (aka partial wave analysis)
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* [https://github.com/mashephe/AmpTools AmpTools]: Amplitude analysis package (aka partial wave analysis)
 
* [[Calibration Database|CCDB]]: Calibration Database
 
* [[Calibration Database|CCDB]]: Calibration Database
 
** [[Policy on CCDB Variations for Reconstructing Simulated Data]]
 
** [[Policy on CCDB Variations for Reconstructing Simulated Data]]
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**[https://halldweb.jlab.org/gluex_sim/Dashboard.html '''Active Sample Dashboard''']
 
**[https://halldweb.jlab.org/gluex_sim/Dashboard.html '''Active Sample Dashboard''']
 
**[https://halldweb.jlab.org/gluex_sim/SubmitSim.html '''MC Submission Form''']
 
**[https://halldweb.jlab.org/gluex_sim/SubmitSim.html '''MC Submission Form''']
* [https://pypwa.jlab.org/index.html PyPWA]
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* [https://pypwa.jlab.org/index.html PyPWA:] [https://pypwa.readthedocs.io/ Python-based Partial Wave Analysis Toolkit]
 
* [https://github.com/JeffersonLab/rcdb/wiki RCDB]: Run Conditions Database
 
* [https://github.com/JeffersonLab/rcdb/wiki RCDB]: Run Conditions Database
 
** [https://halldweb.jlab.org/rcdb/ Web Interface]
 
** [https://halldweb.jlab.org/rcdb/ Web Interface]
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** [https://scicomp.jlab.org/scicomp/#/disk/work Work]
 
** [https://scicomp.jlab.org/scicomp/#/disk/work Work]
 
*** [https://halldweb.jlab.org/disk_management/work_report.html /work/halld leader board]
 
*** [https://halldweb.jlab.org/disk_management/work_report.html /work/halld leader board]
*** [https://halldweb.jlab.org/disk_management/work3_report.html /work/halld3 leader board]
 
 
* [[GlueX-related shared accounts on the JLab CUE]]
 
* [[GlueX-related shared accounts on the JLab CUE]]
 
* [[Hall D MySQL/MariaDB Servers and Replication Relationship]]: a list of database servers
 
* [[Hall D MySQL/MariaDB Servers and Replication Relationship]]: a list of database servers
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* [https://data.jlab.org/drupal/?q=system/files/Offline%20Plan%20FY10.pdf JLab Offline Computing Plan, FY2010]
 
* [https://data.jlab.org/drupal/?q=system/files/Offline%20Plan%20FY10.pdf JLab Offline Computing Plan, FY2010]
 
* [[Role of the Software Coordinator]]
 
* [[Role of the Software Coordinator]]
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=== Containers ===
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* [[GlueX and Containers]]: an overview of the use of containers in GlueX
  
 
==Meetings and Reviews==
 
==Meetings and Reviews==

Latest revision as of 18:52, 31 January 2024

News:

Quick Links:

The legacy version of this page is here.

General Information

Build Scripts: A Version Management System for GlueX describes a standard directory structure for GlueX software, how to create complete or partial builds, and how to specify versions of individual packages, both for building and for use. It is also available as GlueX Note 2793.

See below for other helpful links.

Shell Environment Set-Up

Building GlueX Software

GlueX and Containers

Software Documentation

Packages used in the GlueX software stack with links to package-specific documentation.

GlueX Software

Documentation for software packages specific to GlueX or to JLab.

  • A brief overview of the GlueX-specific software can be found here
  • Best practices in writing code for the HallD/GlueX software environment check out this link of HallD/GlueX Coding Conventions
  • A convenient way to enhance the impact of comments inside the code is to use Doxygen. The hooks and infrastructures are already implemented for the packages halld_recon and halld_sim.
  • Documentation Initiative

Software Packages

Special Topics

  1. Material on Splitoffs

Documentation for External Software Packages

Documentation on additional software packages used by GlueX. Development and maintenance of these are not directly related to GlueX.

Data Sets

Offline Data Monitoring

Computing Facilities

JLab

Grid

Off-Site Computing Resources

Software Management

Source Code Management

Testing and Debugging

Governance, Conventions, Standard Practices

Containers

Meetings and Reviews

Communication and Help

FAQ

Legacy Links